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    si:ch73-29l19.1 si:ch73-29l19.1 [ Danio rerio (zebrafish) ]

    Gene ID: 100148308, updated on 27-Mar-2024

    Summary

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    Official Symbol
    si:ch73-29l19.1provided by ZNC
    Official Full Name
    si:ch73-29l19.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-141222-33
    See related
    Ensembl:ENSDARG00000100255 AllianceGenome:ZFIN:ZDB-GENE-141222-33
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    lnp1
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human LNP1 (leukemia NUP98 fusion partner 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (36807832..36819379)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (36829967..36841477)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438742 Neighboring gene OPA1 mitochondrial dynamin like GTPase Neighboring gene transmembrane protein 45a Neighboring gene SFT2 domain containing 2a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    leukemia NUP98 fusion partner 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      36807832..36819379
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001923825.4 → XP_001923860.1  leukemia NUP98 fusion partner 1

      UniProtKB/TrEMBL
      A0A0R4IJB6, A0A8M1QLU4
      Related
      ENSDARP00000134367.1, ENSDART00000161708.2
      Conserved Domains (1) summary
      pfam15419
      Location:5 → 126
      LNP1; Leukemia NUP98 fusion partner 1
    Nucleotide Protein Strain
    Heading Accession and Version

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